Publications & Datasets

Nanostructure Formation in Glycerolipid Films during Enzymatic Hydrolysis: A GISAXS Study
Freire Rafael V. M., Tran Bettina, Debas Meron, Zabara Mahsa, Amenitsch Heinz, Salentinig Stefan
ACS Applied Materials & Interfaces (2024)

View dataset

Dataset title : Dataset for article: Nanostructure Formation in Glycerolipid Films during Enzymatic Hydrolysis: A GISAXS Study

Dataset persistent identifier : 10.5281/zenodo.14062569

Responsible person : FREIRE Rafael

Project(s) involved : Antimicrobial surfaces

URL : https://zenodo.org/records/14062569

Biogeography confounds the signal of cospeciation in Batesian mimicry
Van Dam Matthew H., Parisotto Alessandro, Medina Milton N., Cabras Analyn A., Gutiérrez-Trejo Nayeli, Wilts Bodo D., Lam Athena W.
Current Biology (2024)

Colloidal Structure Dictates Antimicrobial Efficacy in LL‐37 Self‐Assemblies With Glycerol Monooleate
Valentin Jules D. P., Kadakia Parth, Varidel Lucie J., Stuart Marc C. A., Salentinig Stefan
Small (2024)

Revisiting the density profile of the fuzzy sphere model for microgel colloids
Scheffold Frank
Soft Matter (2024)

View dataset

Dataset title : Revisiting the Density Profile of the Fuzzy Sphere Model for Microgel Colloids v2

Dataset persistent identifier : 10.5281/zenodo.13895421

Responsible person : SCHEFFOLD Frank

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/13895421

Ultrasensitive detection of cancer-associated nucleic acids and mutations by primer exchange reaction-based signal amplification and flow cytometry
Kocabey Samet, Cattin Sarah, Gray Isabelle, Rüegg Curzio
Biosensors and Bioelectronics 267 , 116839 (2024)

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Dataset title : Ultrasensitive detection of cancer-associated nucleic acids and mutations by primer exchange reaction-based signal amplificaiton and flow cytometry

Dataset persistent identifier : 10.5281/zenodo.13919554

Responsible person : KOCABEY Samet

Project(s) involved : DNA Origami-based sensor for the multiplex detection of mRNA in cancer

URL : https://zenodo.org/records/13919554

Swelling and Degrafting of Poly(3-sulfopropyl methacrylate) Brushes
Sant Sabrina, Kaur Kuljeet, Klok Harm-Anton
Langmuir (2024)

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Dataset title : Swelling and Degrafting of Poly(3-sulfopropyl methacrylate) Brushes

Dataset persistent identifier : https://zenodo.org/records/13853762

Responsible person : SANT Sabrina

Project(s) involved : Mechanically responsive nanoparticles

URL : 10.5281/zenodo.13853762

Block Copolymer-Directed Single-Diamond Hybrid Structures Derived from X-ray Nanotomography
Djeghdi Kenza, Karpov Dmitry, Abdollahi S. Narjes, Godlewska Karolina, Iseli René, Holler Mirko, Donnelly Claire, Yuasa Takeshi, Sai Hiroaki, Wiesner Ulrich B., Steiner Ullrich, Wilts Bodo D., Musya Michimasa, Fukami Shunsuke, Ohno Hideo, Diaz Ana, Llandro Justin, Gunkel Ilja
ACS Nano (2024)

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Dataset title : Morphology and defects in 3D self-assembled diamond networks

Dataset persistent identifier : 10.16907/409237cf-63de-43ca-b525-a68025a93d63

Responsible person : GUNKEL Ilja

Project(s) involved : Complete photonic band gap materials made by self-assembly of bottlebrush block terpolymers

URL : https://doi.psi.ch/detail/10.16907/409237cf-63de-43ca-b525-a68025a93d63

View dataset 2

Dataset title : Research data supporting "Block copolymer-directed single diamond hybrid structures derived from X-ray nanotomography"

Dataset persistent identifier : https://zenodo.org/records/7849558

Responsible person : GUNKEL Ilja

Project(s) involved : Complete photonic band gap materials made by self-assembly of bottlebrush block terpolymers

URL : https://zenodo.org/records/7849558

3D Printable κ‐Carrageenan‐Based Granular Hydrogels
Bono Francesca, Strässle Zuniga Sophie Hélène, Amstad Esther
Advanced Functional Materials (2024)

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Dataset title : 3D Printable κ-Carrageenan-Based Granular Hydrogels

Dataset persistent identifier : 10.5281/zenodo.13837487

Responsible person : BONO Francesca

Project(s) involved : Fabrication of load-bearing soft actuators

URL : https://zenodo.org/records/13837487

Bio‐Informed Porous Mineral‐Based Composites
Zhao Ran, Amstad Esther
Small (2024)

CoupledElectricMagneticDipoles.jl - Julia modules for coupled electric and magnetic dipoles method for light scattering, and optical forces in three dimensions
Muster Augustin, Abujetas Diego R., Scheffold Frank, Froufe-Pérez Luis S.
Computer Physics Communications , 109361 (2024)

A Coarse-Grained SPICA Makeover for Solvated and Bare Sodium and Chloride Ions
Prabhu Janak, Frigerio Matteo, Petretto Emanuele, Campomanes Pablo, Salentinig Stefan, Vanni Stefano
Journal of Chemical Theory and Computation (2024)

Rescaling protein-protein interactions improves Martini 3 for flexible proteins in solution
Thomasen F. Emil, Skaalum Tórur, Kumar Ashutosh, Srinivasan Sriraksha, Vanni Stefano, Lindorff-Larsen Kresten
Nature Communications 15 (2024)

View dataset

Dataset title : Supporting scripts and data for Rescaling protein-protein interactions improves Martini 3 for flexible proteins in solution

Dataset persistent identifier : 10.5281/zenodo.11545138

Responsible person : KUMAR Ashutosh

Project(s) involved : Increasing dispersion stability with biocompatible small molecules

URL : https://zenodo.org/records/11545138

View dataset 2

Dataset title : Supporting data for protein membrane simulations in "Recalibration of protein interactions in Martini 3"

Dataset persistent identifier : 10.1101/2023.05.29.542689

Responsible person : KUMAR Ashutosh

Project(s) involved : Increasing dispersion stability with biocompatible small molecules

URL : https://zenodo.org/records/8154919

View dataset 3

Dataset title : Supporting data for transmembrane domain self association simulations in "Recalibration of protein interactions in Martini 3"

Dataset persistent identifier : 10.5281/zenodo.10949496

Responsible person : KUMAR Ashutosh

Project(s) involved : Increasing dispersion stability with biocompatible small molecules

URL : https://zenodo.org/records/10949496

Directed evolution of material-producing microorganisms
Laurent Julie M., Jain Ankit, Kan Anton, Steinacher Mathias, Enrriquez Casimiro Nadia, Stavrakis Stavros, deMello Andrew J., Studart André R.
Proceedings of the National Academy of Sciences 121 (2024)

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Dataset title : Komagataeibacter sucrofermentans evolution

Dataset persistent identifier : PRJNA1031169

Responsible person : STUDART André

Project(s) involved : Transiently pulsating materials inspired by the heart

URL : https://www.ncbi.nlm.nih.gov/bioproject/PRJNA1031169

High-resolution three-dimensional imaging of topological textures in nanoscale single-diamond networks
Karpov D., Djeghdi K., Holler M., Abdollahi S. Narjes, Godlewska K., Donnelly C., Yuasa T., Sai H., Wiesner U. B., Wilts B. D., Steiner U., Musya M., Fukami S., Ohno H., Gunkel I., Diaz A., Llandro J.
Nature Nanotechnology (2024)

View dataset

Dataset title : Morphology and defects in 3D self-assembled diamond networks

Dataset persistent identifier : https://doi.org/10.16907/409237cf-63de-43ca-b525-a68025a93d63

Responsible person : WILTS Bodo

Project(s) involved : Complete photonic band gap materials made by self-assembly of bottlebrush block terpolymers

URL : https://doi.org/10.16907/409237cf-63de-43ca-b525-a68025a93d63

View dataset 2

Dataset title : Ptychographic and tomographic reconstructions of a triblock copolymer soft matter crystal replicated into gold

Dataset persistent identifier : https://doi.org/10.16907/a961ab58-de00-40b4-ad6c-bc096776c476

Responsible person : WILTS Bodo

Project(s) involved : Complete photonic band gap materials made by self-assembly of bottlebrush block terpolymers

URL : https://doi.org/10.16907/a961ab58-de00-40b4-ad6c-bc096776c476

Nature-inspired recycling of a protein mixture into a green fluorescent protein-based hydrogel
Roset Julià Laura, Maerkl Sebastian J., Stellacci Francesco
RSC Sustainability (2024)

View dataset

Dataset title : Nature-inspired recycling of a protein mixture into a green fluorescent protein-based hydrogel

Dataset persistent identifier : 10.5281/zenodo.12700532

Responsible person : ROSET JULIA Laura

Project(s) involved : Novel antiviral supramolecular materials

URL : https://zenodo.org/records/12700532

Volume Phase Transition of Thermoresponsive Microgels Scrutinized by Dynamic Light Scattering and Turbidity: Correlations Depend on Microgel Homogeneity
Otten Marius, Hildebrandt Marco, Pfeffing Ben, Voigt Victoria Carina, Scheffold Frank, Hellweg Thomas, Karg Matthias
Langmuir 40 , 14515-14526 (2024)

The impact of macrophage phenotype and heterogeneity on the total internalized gold nanoparticle counts
Lee Henry, Vanhecke Dimitri, Balog Sandor, Taladriz-Blanco Patricia, Petri-Fink Alke, Rothen-Rutishauser Barbara
Nanoscale Advances (2024)

View dataset

Dataset title : FIB-SEM tomography datasets of entire single-cell human monocyte derived macrophages

Dataset persistent identifier : 10.5281/zenodo.11186312

Responsible person : VANHECKE Dimitri

Project(s) involved : Dynamic surfaces for tissue engineering and tissue remodeling

URL : https://zenodo.org/records/11186312

Universal Click-Chemistry Approach for the DNA Functionalization of Nanoparticles
Siegel Nicole, Hasebe Hiroaki, Chiarelli Germán, Garoli Denis, Sugimoto Hiroshi, Fujii Minoru, Acuna Guillermo P., Kołątaj Karol
Journal of the American Chemical Society (2024)

Magnetic Hair Tactile Sensor for Directional Pressure Detection
Meier Yuki A., Duhr Pierre, Mordarski Marcel, Vergne Céline, Poloni Erik, Studart André R., Pascal Joris, Demirörs Ahmet F.
Advanced Intelligent Systems (2024)

View dataset

Dataset title : Magnetic Hair Tactile Sensor for Directional Pressure Detection

Dataset persistent identifier : 10.5281/zenodo.11390931

Responsible person : DEMIROERS Ahmet

Project(s) involved : Development of controlled delivery systems for organ-on-chip devices

URL : https://zenodo.org/records/11390931

Optical Monitoring of Supramolecular Interactions in Polymers
Kiebala Derek J., Dodero Andrea, Weder Christoph, Schrettl Stephen
Angewandte Chemie International Edition (2024)

View dataset

Dataset title : Dataset for "Optical Monitoring of Supramolecular Interactions in Polymers"

Dataset persistent identifier : 10.5281/zenodo.12189034

Responsible person : KIEBALA Derek

Project(s) involved : Mechanically responsive and mechanically adapting polymers

URL : https://zenodo.org/records/12189034

Large-area, self-healing block copolymer membranes for energy conversion
Sproncken Christian C. M., Liu Peng, Monney Justin, Fall William S., Pierucci Carolina, Scholten Philip B. V., Van Bueren Brian, Penedo Marcos, Fantner Georg Ernest, Wensink Henricus H., Steiner Ullrich, Weder Christoph, Bruns Nico, Mayer Michael, Ianiro Alessandro
Nature (2024)

View dataset

Dataset title : Dataset for MS 2023-04-06217B

Dataset persistent identifier : 10.5281/zenodo.7818212

Responsible person : IANIRO Alessandro

Project(s) involved : Ion-selective membranes for power conversion from salinity gradients with unprecedented efficiency

URL : https://zenodo.org/records/7818212

Mechanochromic Polyolefin Elastomers
Micheletti Cosimo, Soldati Luca, Weder Christoph, Pucci Andrea, Clough Jess M.
ACS Applied Polymer Materials (2024)

View dataset

Dataset title : Mechanochromic Polyolefin Elastomers

Dataset persistent identifier : 10.5281/zenodo.11283454

Responsible person : CLOUGH Jessica

Project(s) involved : Mechanochromic force transducers for biosystems and synthetic hydrogels

URL : https://zenodo.org/records/11283455

Amphiphilic Lipids for Food Functionality
Freire Rafael V.M., Salentinig Stefan
Current Opinion in Colloid & Interface Science , 101817 (2024)

Engineering nanomaterials for glioblastoma nanovaccination
Hameedat Fatima, Mendes Bárbara B., Conniot João, Di Filippo Leonardo D., Chorilli Marlus, Schroeder Avi, Conde João, Sousa Flávia
Nature Reviews Materials (2024)

Phase-separated droplets swim to their dissolution
Jambon-Puillet Etienne, Testa Andrea, Lorenz Charlotta, Style Robert W., Rebane Aleksander A., Dufresne Eric R.
Nature Communications 15 (2024)

View dataset

Dataset title : Dialytaxis_Codes&Data

Dataset persistent identifier : 10.5281/zenodo.10912624

Responsible person : LORENZ Charlotta

Project(s) involved : Increasing dispersion stability with biocompatible small molecules

URL : https://zenodo.org/records/10912624

pH‐Responsive Virus‐Based Colloidal Crystals for Advanced Material Platforms
Tran Bettina, Watts Samuel, Valentin Jules D. P., Raßmann Nadine, Papastavrou Georg, Ramstedt Madeleine, Salentinig Stefan
Advanced Functional Materials (2024)

Influence of the hydrophile–lipophile balance of perfluorinated surfactants on the emulsion stability
De Angelis Gaia, Amstad Esther
MRS Bulletin (2024)

View dataset

Dataset title : Influence of the hydrophile–lipophile balance of perfluorinated surfactants on the emulsion stability

Dataset persistent identifier : 10.5281/zenodo.11082942

Responsible person : DE ANGELIS Gaia

Project(s) involved : 3D printing of functional organoids using viscoelastic capsules

URL : https://zenodo.org/records/11082942

Label-Free Techniques for Probing Biomolecular Condensates
Ibrahim Khalid A., Naidu Akhil S., Miljkovic Helena, Radenovic Aleksandra, Yang Wayne
ACS Nano 18 , 10738-10757 (2024)

Mechanically triggered on-demand degradation of polymers synthesized by radical polymerizations
Liu Peng, Jimaja Sètuhn, Immel Stefan, Thomas Christoph, Mayer Michael, Weder Christoph, Bruns Nico
Nature Chemistry (2024)

View dataset

Dataset title : Mechanically Triggered On-Demand Degradation of Polymers Synthesized by Radical Polymerizations

Dataset persistent identifier : 10.6084/m9.figshare.21646715.v1

Responsible person : LIU Peng

Project(s) involved : Ion-selective membranes for power conversion from salinity gradients with unprecedented efficiency

URL : https://figshare.com/s/6848aa70a976c52d7678

Microfluidically Produced Microcapsules with Amphiphilic Polymer Conetwork Shells
Velasquez Sara T. R., Belluati Andrea, Tervoort Elena, Mattich Iacopo, Hertel Brigitte, Russell Sam, Gouveia Micael G., Grysan Patrick, Mugemana Clément, Studart André R., Bruns Nico
Advanced Materials Technologies (2024)

View dataset

Dataset title : Data for: "Microfluidically produced microcapsules with amphiphilic polymer conetwork shells"

Dataset persistent identifier : 10.15129/873f0d6d-16b3-4fab-bc07-9a903bc04d8c

Responsible person : BRUNS Nico

Project(s) involved : Mechanically responsive block copolymer nanoreactors inspired by the marine bioluminescence of dinoflagellates

URL : https://pureportal.strath.ac.uk/en/datasets/data-for-microfluidically-produced-microcapsules-with-amphiphilic

In silico screening of potential agonists of a glucagon-like peptide-1 receptor among female sex hormone derivatives
Nedyalkova Miroslava, Robeva Ralitsa, Romanova Julia, Yovcheva Kirila, Lattuada Marco, Simeonov Vasil
Journal of Biomolecular Structure and Dynamics , 1-12 (2024)

View dataset

Dataset title : Docking results and electronic descriptors

Dataset persistent identifier : 10.5281/zenodo.13954174

Responsible person : NEDYALKOVA Miroslava

Project(s) involved : Enhancing structural colour through absorption

URL : https://zenodo.org/records/13954174

Does the surface charge of the nanoparticles drive nanoparticle–cell membrane interactions?
Balog Sandor, de Almeida Mauro Sousa, Taladriz-Blanco Patricia, Rothen-Rutishauser Barbara, Petri-Fink Alke
Current Opinion in Biotechnology 87 , 103128 (2024)

4-[(E)-2-(1-Pyrenyl)Vinyl]Pyridine Complexes: How to Modulate the Toxicity of Heavy Metal Ions to Target Microbial Infections
Schwarte Justine V., Crochet Aurélien, Fromm Katharina M.
Molecules 29 , 1565 (2024)

3D Printing of Double Network Granular Elastomers with Locally Varying Mechanical Properties
Baur Eva, Tiberghien Benjamin, Amstad Esther
Advanced Materials (2024)

View dataset

Dataset title : 3D Printing of Double Network Granular Elastomers with Locally Varying Mechanical Properties

Dataset persistent identifier : 10.5281/zenodo.11060055

Responsible person : BAUR Eva

Project(s) involved : Fabrication of load-bearing soft actuators

URL : https://zenodo.org/records/11060055

Disulfide-Cross-Linked Tetra-PEG Gels
Meng Zhao, Löser Lucas, Saalwächter Kay, Gasser Urs, Klok Harm-Anton
Macromolecules 57 , 3058-3065 (2024)

View dataset

Dataset title : Dataset for Disulfide-Crosslinked Tetra-PEG Gels

Dataset persistent identifier : 10.5281/zenodo.10775482

Responsible person : MENG Zhao

Project(s) involved : Mechanochromic force transducers for biosystems and synthetic hydrogels

URL : https://zenodo.org/records/10775482

Nanofluidic logic with mechano–ionic memristive switches
Emmerich Theo, Teng Yunfei, Ronceray Nathan, Lopriore Edoardo, Chiesa Riccardo, Chernev Andrey, Artemov Vasily, Di Ventra Massimiliano, Kis Andras, Radenovic Aleksandra
Nature Electronics 7 , 271-278 (2024)

Interfacial structurization between triolein and water from pH and buffer ions
Frigerio Matteo, V. M. Freire Rafael, Soares Thereza A., Amenitsch Heinz, Leser Martin E., Salentinig Stefan
Journal of Colloid and Interface Science (2024)

Osmosis-driven stiffening of structured hydrogels
Zhao Ran, Thoma Alexandra, Amstad Esther
Applied Materials Today 37 , 102155 (2024)

View dataset

Dataset title : Osmosis-driven stiffening of structured hydrogels

Dataset persistent identifier : 10.5281/zenodo.11186363

Responsible person : ZHAO Ran

Project(s) involved : Fabrication of load-bearing soft actuators

URL : https://zenodo.org/records/11186363

Anoplophora graafi longhorn beetle coloration is due to disordered diamond-like packed spheres
Djeghdi Kenza, Schumacher Cédric, Bauernfeind Viola, Gunkel Ilja, Wilts Bodo D., Steiner Ullrich
Soft Matter (2024)

The Effect of Substrate Properties on Cellular Behavior and Nanoparticle Uptake in Human Fibroblasts and Epithelial Cells
Sousa de Almeida Mauro, Lee Aaron, Itel Fabian, Maniura-Weber Katharina, Petri-Fink Alke, Rothen-Rutishauser Barbara
Nanomaterials 14 , 342 (2024)

View dataset

Dataset title : The Effect of Substrate Properties on Cellular Behavior and Nanoparticle Uptake in Human Fibroblasts and Epithelial Cells

Dataset persistent identifier : 10.5281/zenodo.10631246

Responsible person : ALMEIDA Mauro

Project(s) involved : Dynamic surfaces for tissue engineering and tissue remodeling

URL : https://zenodo.org/records/10631246

Mechanochromic polymer blends made with an excimer-forming telechelic sensor molecule
Oggioni Marta, Clough Jess M., Weder Christoph
Soft Matter (2024)

View dataset

Dataset title : Dataset of Mechanochromic polymer blends made with an excimer-forming telechelic sensor molecule

Dataset persistent identifier : 10.5281/zenodo.10276391

Responsible person : WEDER Christoph

Project(s) involved : Mechanochromic force transducers for biosystems and synthetic hydrogels

URL : https://zenodo.org/records/10276391

Determining intrinsic potentials and validating optical binding forces between colloidal particles using optical tweezers
Zhang Chi, Muñetón Díaz José, Muster Augustin, Abujetas Diego R., Froufe-Pérez Luis S., Scheffold Frank
Nature Communications 15 (2024)

View dataset

Dataset title : Determining intrinsic potentials and validating optical binding forces between colloidal particles using optical tweezers - Part I

Dataset persistent identifier : 10.5281/zenodo.10245934

Responsible person : ZHANG Chi

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/10245934

View dataset 2

Dataset title : Determining intrinsic potentials and validating optical binding forces between colloidal particles using optical tweezers - Part II

Dataset persistent identifier : 10.5281/zenodo.10245965

Responsible person : ZHANG Chi

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/10245965

View dataset 3

Dataset title : Particle tracking: Full Reconstruction of Image Gradient

Dataset persistent identifier : 10.5281/zenodo.10053674

Responsible person : ZHANG Chi

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/10053674

Super-Resolution Microscopy for Material Science
Albertazzi Lorenzo, Zijlstra Peter
not found (2024)

Tuning disorder in structurally colored bioinspired photonic glasses
Demirörs Ahmet F., Manne Kalpana, Magkiriadou Sofia, Scheffold Frank
Soft Matter (2024)

View dataset

Dataset title : Tuning Disorder in Structurally Colored Bioinspired Photonic Glasses

Dataset persistent identifier : 10.5281/zenodo.10683318

Responsible person : DEMIROERS Ahmet

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/10683318

Photonic spheres by microgel templating [Invited]
Manne Kalpana, Magkiriadou Sofia, Yazhgur Pavel, Demirörs Ahmet F., Scheffold Frank
Optical Materials Express 14 , 598 (2024)

View dataset

Dataset title : Photonic spheres by microgel templating

Dataset persistent identifier : 10.5281/zenodo.10469489

Responsible person : MANNE Kalpana

Project(s) involved : Complex disordered photonic architectures by self-assembly

URL : https://zenodo.org/records/10469489

Thin film structural color is widespread in slime molds (Myxomycetes, Amoebozoa)
Bauernfeind Viola, Ronikier Anna, Ronikier Michał, Kozlowski Gregor, Steiner Ullrich, Wilts Bodo D.
Optics Express 32 , 5429 (2024)

View dataset

Dataset title : Thin film structural color is widespread in slime molds (Myxomycetes, Amoebozoa)

Dataset persistent identifier : 10.5281/zenodo.10000371

Responsible person : BAUERNFEIND Viola

Project(s) involved : Complete photonic band gap materials made by self-assembly of bottlebrush block terpolymers

URL : https://doi.org/10.5281/zenodo.10000371

The full list of datasets can be found here